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SRX4553032: RNA-seq of Lactobacillus plantarum 4_3 folate synthesis
1 ILLUMINA (HiSeq X Ten) run: 9.2M spots, 2.8G bases, 1.1Gb downloads

Design: PC12h_replicate3
Submitted by: Kunming University of Science and Technology
Study: Transcriptomic Analysis of Lactobacillus plantarum 4_3 folate synthesis
show Abstracthide Abstract
The general objective of this work was to investigate the genetic potential of a high yield folate L. plantarum strain 4_3 to improve the understanding of all genes related to folate synthesis pathway. First, we sequenced the genome sequence of the strain to obtain the most complete overview possible of its potential. Then, the strain was grown under folate deficient laboratory medium and soybean medium. Basic fermentation characteristics were monitored, such as pH and folate yield, as well as the respective transcriptomic profiles. Monitoring of gene expression of folate production in the fermentation process is still blank. This approach allowed the identification of fermentation conditions that modulate specific physiological characteristics of L. plantarum 4_3, such as folate synthesis, as well as gene expression profiles.
Sample: Transcriptomic Analysis of Lactobacillus plantarum 4_3 folate synthesis
SAMN09711375 • SRS3670065 • All experiments • All runs
Library:
Name: PC12h_3
Instrument: HiSeq X Ten
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 9.2M spots, 2.8G bases, 1.1Gb
Run# of Spots# of BasesSizePublished
SRR76939439,232,4422.8G1.1Gb2018-08-14

ID:
6161081

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